Availability of horse mackerel (Trachurus trachurus) in the north-eastern North Sea, predicted by the transport of Atlantic water

One of the clearest relationships between a single marine climate variable and fisheries yield is found between the transport of Atlantic water into the North Sea in the winter and catches of horse mackerel (Trachurus trachurus L.) in the northern North Sea 6 months later. A three‐dimensional numerical model, the NORWegian ECOlogical Model system (NORWECOM), has estimated this inflow during the winter from 1976 to 2000, which is strongly correlated with the Norwegian fleet's catch of horse mackerel (r² = 0.70) in the following autumn. It is hypothesized that a large influx of this relatively warm and nutrient rich water during the winter may support an early spawning of zooplankton and high biological production during the spring and summer. This might be the biological reason for a large fraction of the horse mackerel stock migrating into the North Sea during strong inflows.     

Barley callus: a model system for bioengineering of starch in cereals

ABSTRACT: BACKGROUND: Starch is the most important source of calories for human nutrition and the majority of it is produced by cereal farming. Starch is also used as a renewable raw material in a range of industrial sectors. It can be chemically modified to introduce new physicochemical properties. In this way starch is adapted to a variety of specific end-uses. Recombinant DNA technologies offers an alternative to starch industrial processing. The plant biosynthetic pathway can be manipulated to design starches with novel structure and improved technological properties. In the future this may reduce or eliminate the economical and environmental costs of industrial modification. Recently, many advances have been achieved to clarify the genetic mechanism that controls starch biosynthesis. Several genes involved in the synthesis and modification of complex carbohydrates in many organisms have been identified and cloned. This knowledge suggests a number of strategies and a series of candidate genes for genetic transformation of crops to generate new types of starch-based polymers. However transformation of cereals is a slow process and there is no easy model system available to test the efficiency of candidate genes in planta. RESULTS: We explored the possibility to use transgenic barley callus generated from immature embryo for a fast test of transgenic modification strategies of starch biosynthesis. We found that this callus contains 4 % (w/w dw) starch granules, which we could modify by generating fully transgenic calli by Agrobacterium-transformation. A Green Fluorescent Protein reporter protein tag was used to identify and propagate only fully transgenic callus explants. Around 1 -- 1.5 g dry weight of fully transgenic callus could be produced in 9 weeks. Callus starch granules were smaller than endosperm starch granules and contained less amylose. Similarly the expression profile of starch biosynthesis genes were slightly different in callus compared with developing endosperm. CONCLUSIONS: In this study we have developed an easy and rapid in planta model system for starch bioengineering in cereals. We suggest that this method can be used as a time-efficient model system for fast screening of candidate genes for the generation of modified starch or new types of carbohydrate polymers.     

Mechanism of voltage gating in potassium channels

The mechanism of ion channel voltage gating-how channels open and close in response to voltage changes-has been debated since Hodgkin and Huxley's seminal discovery that the crux of nerve conduction is ion flow across cellular membranes. Using all-atom molecular dynamics simulations, we show how a voltage-gated potassium channel (KV) switches between activated and deactivated states. On deactivation, pore hydrophobic collapse rapidly halts ion flow. Subsequent voltage-sensing domain (VSD) relaxation, including inward, 15-angstrom S4-helix motion, completes the transition. On activation, outward S4 motion tightens the VSD-pore linker, perturbing linker-S6-helix packing. Fluctuations allow water, then potassium ions, to reenter the pore; linker-S6 repacking stabilizes the open pore. We propose a mechanistic model for the sodium/potassium/calcium voltage-gated ion channel superfamily that reconciles apparently conflicting experimental data.     

Glacial survival of boreal trees in northern Scandinavia

It is commonly believed that trees were absent in Scandinavia during the last glaciation and first recolonized the Scandinavian Peninsula with the retreat of its ice sheet some 9000 years ago. Here, we show the presence of a rare mitochondrial DNA haplotype of spruce that appears unique to Scandinavia and with its highest frequency to the west-an area believed to sustain ice-free refugia during most of the last ice age. We further show the survival of DNA from this haplotype in lake sediments and pollen of Tr?ndelag in central Norway dating back ~10,300 years and chloroplast DNA of pine and spruce in lake sediments adjacent to the ice-free And?ya refugium in northwestern Norway as early as ~22,000 and 17,700 years ago, respectively. Our findings imply that conifer trees survived in ice-free refugia of Scandinavia during the last glaciation, challenging current views on survival and spread of trees as a response to climate changes.     

Mineralization of the herbicide MCPA in urban soils is linked to presence and growth of class III tfdA genes

Mineralization and sorption of ¹⁴C-ring labeled herbicide 2-methyl-4-chlorophenoxyacetic acid (MCPA) were quantified along with the tfdA gene abundance in 7 different soils. The soils tested were five gravel soils from urban locations, one soil from the embankment of a railway track, and finally an agricultural soil as a control. The mineralization experiments were performed with a concentration of MCPA of 5 mg/kg and incubated at 10 °C for a period of 60 days.With K_d values ranging from 0.04 to 0.41 l kg⁻¹ the sorption experiments revealed that binding of MCPA to the six gravel soils was lower compared to the control soil which had a K_d value of 0.91 l kg⁻¹. The potential for MCPA mineralization varied from less than 5 to over 55% mineralized in 60 days. The most rapid MCPA mineralization was observed in the soil from the Danish railway tracks with 55% mineralized after only 18 days. The mineralization data was fitted to degradation kinetic models, which indicated that growth occurred as a response to MCPA degradation in most of the soils.Soil DNA was extracted and tfdA genes responsible for the first step in MCPA degradation were quantified by real-time PCR (qPCR) at appropriate time points throughout the mineralization experiments. Indicating growth of specific MCPA degraders, the abundance of class III tfdA genes showed an increase during MCPA mineralization in those soils able to mineralize MCPA.These findings emphasize the importance of the presence of microorganisms that are able to readily degrade MCPA, to avoid groundwater leaching following use on urban gravel areas that possess low binding ability of the compound.     

Electrochemical in situ impregnation of wood using a copper nail as source for copper

A new method for copper impregnation of wood in structures was suggested and tested in laboratory scale with specimen of new pine sapwood. A copper nail and a steel screw were placed in the wood, and an electric direct current field was applied, so the copper nail was anode and the screw was cathode. At the anode, copper ions were generated. The copper ions were transported into the wood by electromigration (movement of ions in an applied electric field) towards the cathode, and a volume between the two electrodes was thereby impregnated. Copper also moved to a lesser degree in the opposite direction, probably due to capillary effects, and a smaller volume behind the anode was impregnated as well. The impregnation perpendicular to the grain was limited compared to the one along the grain. The highest Cu concentrations were obtained close to the anode.     

The Effects of Feeding Peptide-Precipitating Lignosulphonic Acids in Various Concentrations to Growing Pigs

It is shown that lignosulphonic acids, at a concentration of 13 % in conventional feed given to growing pigs, lead to a marked reduction in the weight gain.When given 3 % and 6 % lignosulphonic acids in the feed, no effects on the weight gain were observed as compared to the controls.The weight gain reduction caused by lignosulphonic acids at high levels in the feed is discussed in relation to the inhibitory effects of these acids on a number of biological systems which have been studied previously.     

Activity patterns of free-ranging beef cattle in Norway

The aims of this study were to: 1) build a model to classify cattle activities based on locomotion and neck movement data and 2) study the daily time budget of non-native beef cattle in the boreal forest of southeastern Norway. We used GPS collars programmed to take positions and activity measures every five minutes on 18 cows during the grazing seasons 2015–17, together with behavioural observations in the field. The model classified the collar data into Grazing, Low (resting behaviours) and High (other active behaviours) activity with an accuracy of 79.4%. The cows spent 8.1?±?0.5 (mean?±?SD) hours per day grazing, corresponding to 34%?±?0.5% of their daily time budget. Daily grazing time increased during summer and was longer for lactating than dry cows and at low compared to high stocking density.